STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1939KEGG: fal:FRAAL0073 hypothetical protein; putative signal peptide. (379 aa)    
Predicted Functional Partners:
Krad_3767
Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
    0.673
Krad_1937
PFAM: NADPH-dependent FMN reductase; KEGG: tfu:Tfu_1931 putative oxidoreductase.
       0.528
Krad_1938
PFAM: luciferase family protein; KEGG: nca:Noca_2597 luciferase family protein.
       0.527
Krad_1940
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nfa:nfa32620 putative lipase.
       0.520
Krad_1936
PFAM: low temperature requirement A; KEGG: sco:SCO3192 integral membrane protein.
       0.427
Krad_3866
PFAM: glycosyl transferase family 2; KEGG: fra:Francci3_0730 glycosyl transferase, family 2.
  
     0.413
Krad_3865
PFAM: glycosyl transferase group 1; Methyltransferase type 11; KEGG: tfu:Tfu_2522 glycosyl transferase.
 
     0.404
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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