STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_1956Putative transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: sco:SCO7706 DNA-binding protein. (331 aa)    
Predicted Functional Partners:
Krad_1957
Hypothetical protein.
       0.773
Krad_1995
KEGG: cgb:cg1527 hypothetical protein.
  
     0.771
Krad_1952
KEGG: lxx:Lxx18160 glycerol-phosphate porter.
       0.436
Krad_1953
Hypothetical protein.
       0.436
Krad_1954
KEGG: mxa:MXAN_0293 hypothetical protein.
       0.436
Krad_1955
Acetyltransferase-like; KEGG: dge:Dgeo_0681 hypothetical protein.
       0.436
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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