STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2006Response regulator receiver and ANTAR domain protein; PFAM: GAF domain protein; ANTAR domain protein; KEGG: art:Arth_3170 putative GAF sensor protein. (249 aa)    
Predicted Functional Partners:
Krad_0224
SMART: GAF domain protein; KEGG: sma:SAV4629 hypothetical protein.
 
     0.757
Krad_4493
KEGG: aau:AAur_1975 hypothetical protein.
 
     0.684
Krad_2007
TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: xcv:XCV0667 putative sensor protein.
       0.563
Krad_2008
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rxy:Rxyl_2783 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
       0.548
Krad_4270
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mav:MAV_1440 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.535
Krad_2957
PFAM: Extracellular ligand-binding receptor; KEGG: msm:MSMEG_3247 branched-chain amino acid ABC transporter substrate-binding protein.
  
 
 0.512
Krad_1168
KEGG: tfu:Tfu_0618 hypothetical protein.
  
     0.470
Krad_1804
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sco:SCO4026 ATP binding protein.
 
     0.410
Krad_0082
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mkm:Mkms_4133 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.408
Krad_2005
Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.406
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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