STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2016PFAM: ABC-2 type transporter; KEGG: aau:AAur_3851 putative ABC transporter, efflux permease protein. (268 aa)    
Predicted Functional Partners:
Krad_2017
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3850 putative ABC transporter, ATP-binding protein.
  
 0.971
Krad_3922
PFAM: ABC-2 type transporter; KEGG: nfa:nfa720 putative ABC transporter membrane protein.
 
 
0.900
Krad_3923
TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa710 putative ABC transporter ATP-binding protein.
  
 0.856
Krad_2015
PFAM: regulatory protein MerR; KEGG: mkm:Mkms_5430 putative transcriptional regulator, MerR family.
 
    0.751
Krad_2018
Putative transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription activator effector binding; KEGG: nfa:nfa53700 putative transcriptional regulator.
 
    0.576
Krad_0672
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_6766 ABC transporter, ATP-binding protein, NodI family protein.
  
 0.565
Krad_2014
PFAM: dihydrodipicolinate synthetase; KEGG: rha:RHA1_ro07087 dihydrodipicolinate synthase; Belongs to the DapA family.
       0.505
Krad_2919
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1989 ABC-type multidrug transport system ATPase componen.
  
 0.492
Krad_1125
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: cef:CE1884 putative peptide ABC transporter peptide-binding protein.
  
  
  0.459
Krad_1979
KEGG: sco:SCO6361 integral membrane protein.
 
  
 0.433
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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