STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2017PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_3850 putative ABC transporter, ATP-binding protein. (273 aa)    
Predicted Functional Partners:
Krad_2016
PFAM: ABC-2 type transporter; KEGG: aau:AAur_3851 putative ABC transporter, efflux permease protein.
  
 0.971
Krad_2954
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa18740 putative branched-chain amino acid transporter ATP-binding protein.
     
0.902
Krad_3922
PFAM: ABC-2 type transporter; KEGG: nfa:nfa720 putative ABC transporter membrane protein.
  
 0.861
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
    
0.833
Krad_1369
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_4158 putative ABC transporter, ATP-binding protein.
 
   
0.718
Krad_2015
PFAM: regulatory protein MerR; KEGG: mkm:Mkms_5430 putative transcriptional regulator, MerR family.
 
     0.708
Krad_0916
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aau:AAur_0929 putative sugar ABC transportor, ATP-binding protein.
 
     
0.670
Krad_2955
PFAM: inner-membrane translocator; KEGG: nfa:nfa18730 putative branched-chain amino acid transporter component; Belongs to the binding-protein-dependent transport system permease family.
      0.576
Krad_3974
Hypothetical protein; KEGG: sco:SCO3959 possible integral membrane protein.
  
 
 0.574
Krad_0671
PFAM: ABC-2 type transporter; KEGG: msm:MSMEG_6765 ABC-2 type transporter superfamily protein.
  
 0.555
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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