STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2023PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN1303 oxidoreductase, short-chain alcohol dehydrogenase/reductase family. (275 aa)    
Predicted Functional Partners:
Krad_2908
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO1831 putative oxidoreductase.
  
     0.565
Krad_2024
Putative transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: sco:SCO7140 DNA-binding protein.
       0.553
Krad_2022
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: hne:HNE_1423 putative sensory box-containing diguanylate cyclase.
       0.497
Krad_3343
PFAM: Acyl transferase; KEGG: tfu:Tfu_1973 acyl-carrier-protein S-malonyltransferase.
  
 
 0.448
Krad_0229
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sco:SCO0687 probable oxidoreductase.
  
     0.432
Krad_3346
Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.421
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.