STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2039PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL3147 putative transmembrane transporter. (428 aa)    
Predicted Functional Partners:
Krad_2040
PFAM: regulatory protein ArsR; KEGG: bad:BAD_0218 ArsR-family transcriptional regulator.
 
     0.928
Krad_4354
PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: sma:SAV3894 integral membrane efflux protein.
  
     0.662
Krad_2038
Hypothetical protein.
       0.574
Krad_2041
KEGG: mkm:Mkms_4094 conserved hypothetical protein.
       0.538
Krad_2356
PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: fal:FRAAL1886 putative membrane transport protein.
  
     0.530
Krad_2863
PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: fal:FRAAL1886 putative membrane transport protein.
  
     0.513
Krad_3555
PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aau:AAur_3056 putative major facilitator superfamily (MFS) transporter.
  
     0.463
Krad_2972
KEGG: sco:SCO4186 hypothetical protein.
   
    0.453
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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