STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2046KEGG: rha:RHA1_ro01907 hypothetical protein. (793 aa)    
Predicted Functional Partners:
Krad_2045
PFAM: VWA containing CoxE family protein; KEGG: nfa:nfa46520 hypothetical protein.
   
 0.991
Krad_2048
KEGG: sma:SAV3459 hypothetical protein.
 
     0.959
Krad_2049
PFAM: zinc finger SWIM domain protein; KEGG: rha:RHA1_ro01904 hypothetical protein.
 
     0.959
Krad_2047
PFAM: ATPase associated with various cellular activities AAA_5; KEGG: nfa:nfa46500 hypothetical protein.
 
  
 0.953
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.718
Krad_3261
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aau:AAur_2216 putative iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
    
 
 0.642
Krad_2050
Hypothetical protein.
       0.427
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.