STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2073Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: sco:SCO6169 regulatory protein. (517 aa)    
Predicted Functional Partners:
Krad_1423
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: tfu:Tfu_0691 helix-turn-helix, fis-type.
  
     0.709
Krad_2065
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: rha:RHA1_ro05150 probable transcriptional regulator.
  
     0.687
Krad_4079
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: nca:Noca_4625 purine catabolism PurC domain protein.
  
     0.678
Krad_2076
PFAM: protein of unknown function DUF182; KEGG: sco:SCO6174 hypothetical protein.
 
     0.651
Krad_2074
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mva:Mvan_5280 molybdopterin dehydrogenase, FAD-binding.
     
 0.633
Krad_2075
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rha:RHA1_ro04506 probable xanthine dehydrogenase molybdenum binding subunit.
     
 0.629
Krad_2077
Allantoinase; PFAM: amidohydrolase; KEGG: art:Arth_3693 allantoinase.
 
     0.567
Krad_4484
Putative transcriptional regulator, PucR family; KEGG: sma:SAV2725 transcriptional regulator.
  
     0.411
Krad_2722
PFAM: amino acid permease-associated region; KEGG: msm:MSMEG_1508 amino acid permease-associated region.
 
     0.402
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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