STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2092PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_2602 binding-protein-dependent transport systems inner membrane component. (294 aa)    
Predicted Functional Partners:
Krad_2091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_3267 transporter.
   0.967
Krad_2093
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mkm:Mkms_2603 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.966
Krad_2094
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: msm:MSMEG_3270 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.961
Krad_2090
PFAM: extracellular solute-binding protein family 1; KEGG: msm:MSMEG_3266 maltose/maltodextrin-binding protein.
 
 
 0.909
Krad_4091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4157 binding-protein-dependent transport systems inner membrane component.
 
 0.873
Krad_4401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0953 binding-protein-dependent transport systems inner membrane component.
 
 0.869
Krad_0964
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_0686 putative ABC-type sugar transport systems, permease components.
 
 0.862
Krad_3460
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_0554 ABC transporter permease protein, putative.
   0.861
Krad_4146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4376 putative transmembrane component of ABC transporter.
   0.859
Krad_0386
PFAM: binding-protein-dependent transport systems inner membrane component.
 
   0.850
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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