STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2123PFAM: inner-membrane translocator; KEGG: sma:SAV6655 putative ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (352 aa)    
Predicted Functional Partners:
Krad_2122
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV6656 putative sugar ABC transporter ATP-binding protein.
 
 0.996
Krad_2124
PFAM: inner-membrane translocator; KEGG: sma:SAV6654 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
Krad_2121
PFAM: basic membrane lipoprotein; KEGG: sma:SAV6657 lipoprotein.
 
 
 0.992
Krad_3946
PFAM: inner-membrane translocator; KEGG: art:Arth_1140 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.985
Krad_3948
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: art:Arth_1138 ABC transporter related.
 
 0.984
Krad_3949
PFAM: basic membrane lipoprotein; KEGG: art:Arth_1137 basic membrane lipoprotein.
 
 
 0.968
Krad_3947
PFAM: inner-membrane translocator; KEGG: art:Arth_1139 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
Krad_2125
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: tfu:Tfu_2581 inosine-uridine preferring nucleoside hydrolase.
 
     0.817
Krad_1459
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_3602 ribose transport ATP-binding protein RbsA.
     0.544
Krad_3726
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6567 ABC transporter ATP binding protein.
     0.495
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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