STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2132PFAM: PfkB domain protein; KEGG: ace:Acel_1214 PfkB domain protein. (344 aa)    
Predicted Functional Partners:
Krad_2133
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: vfi:VF0090 2-dehydro-3-deoxyphosphogluconate aldolase.
 
 0.977
Krad_0201
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: pac:PPA0371 KHG/KDPG aldolase.
  
 0.874
Krad_2130
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: msm:MSMEG_2912 inner membrane metabolite transport protein YdfJ.
  
  
 0.790
Krad_2131
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2914 L-idonate 5-dehydrogenase.
  
  
 0.780
Krad_2128
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: msm:MSMEG_2909 starvation-sensing protein RspA.
 
   
 0.647
Krad_0582
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase.
 
  
 0.618
Krad_2129
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ace:Acel_0905 mannitol dehydrogenase, C-terminal domain.
     
 0.557
Krad_4057
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rha:RHA1_ro01352 myo-inositol catabolism IolB protein.
  
  
 0.530
Krad_4056
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rha:RHA1_ro01353 probable acetolactate synthase; Belongs to the TPP enzyme family.
  
  
 0.490
hisA
TIGRFAM: bifunctional HisA/TrpF protein; PFAM: histidine biosynthesis protein; KEGG: art:Arth_1473 bifunctional HisA/TrpF protein.
  
  
 0.486
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.