STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2143PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_1704 putative transport system permease ABC transporter protein. (318 aa)    
Predicted Functional Partners:
Krad_2142
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3312 putative ABC-type sugar transport system, permease component.
   0.965
Krad_2144
PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_3326 extracellular solute-binding protein, family 1.
 
   0.957
Krad_2231
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_pTC20133 putative sugar ABC transporter, permease protein.
   0.871
Krad_0591
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04137 putative transport system permease ABC transporter protein.
   0.865
Krad_2543
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3776 sugar ABC transporter permease.
   0.861
Krad_0589
PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_pTC20132 extracellular solute-binding domain protein.
 
   0.852
Krad_2167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA0400 putative transport system permease protein.
   0.844
Krad_2228
PFAM: extracellular solute-binding protein family 1; KEGG: art:Arth_0780 extracellular solute-binding protein, family 1.
  
   0.842
Krad_3564
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 multiple sugar transport system permease protein.
   0.842
Krad_0963
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO7505 putative integral membrane binding-protein-dependent transport protein.
   0.840
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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