STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2195PFAM: diacylglycerol kinase catalytic region; KEGG: aau:AAur_4154 putative diacylglycerol kinase catalytic domain. (306 aa)    
Predicted Functional Partners:
Krad_2196
PFAM: phospholipase D/Transphosphatidylase; KEGG: mkm:Mkms_0782 phospholipase D/transphosphatidylase.
  
  
 0.783
Krad_2197
KEGG: mva:Mvan_5794 hypothetical protein.
       0.500
Krad_1483
Hypothetical protein; KEGG: mkm:Mkms_0181 conserved hypothetical protein.
  
     0.498
Krad_0405
Hypothetical protein.
  
     0.460
Krad_2443
KEGG: sco:SCO0682 hypothetical protein.
  
     0.451
Krad_3043
KEGG: sco:SCO0682 hypothetical protein.
  
     0.451
Krad_2862
PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: art:Arth_1867 AAA ATPase, central domain protein.
  
 
   0.419
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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