STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2207PFAM: FAD linked oxidase domain protein; KEGG: nfa:nfa45960 putative oxidoreductase. (456 aa)    
Predicted Functional Partners:
Krad_2208
PFAM: NmrA family protein; KEGG: mkm:Mkms_1069 NmrA family protein.
 
   0.613
Krad_2961
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: nca:Noca_3022 glutamate synthase (ferredoxin).
     
 0.497
Krad_0658
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: art:Arth_2741 electron transfer flavoprotein, alpha subunit.
  
 
 0.455
Krad_0657
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: art:Arth_2742 electron transfer flavoprotein beta-subunit.
  
 
 0.454
Krad_1364
KEGG: rha:RHA1_ro05945 hypothetical protein.
  
     0.434
Krad_3251
PFAM: cytochrome c class I; KEGG: sco:SCO2150 cytochrome C heme-binding subunit.
   
 
 0.420
Krad_1384
L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: cgb:cg3227 putative L-lactate dehydrogenase.
  
 0.400
Krad_2981
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: nca:Noca_1980 FMN-dependent alpha-hydroxy acid dehydrogenase.
  
 0.400
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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