STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2362KEGG: sco:SCO0901 hypothetical protein. (564 aa)    
Predicted Functional Partners:
Krad_0013
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: rha:RHA1_ro05742 sugar transferase.
  
  
 0.981
Krad_0563
PFAM: lipopolysaccharide biosynthesis protein; KEGG: mva:Mvan_1681 lipopolysaccharide biosynthesis.
  
 
 0.878
Krad_3885
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2673 O-antigen export system, ATP-binding protein.
  
  
 0.825
Krad_3886
PFAM: ABC-2 type transporter; KEGG: aau:AAur_2674 O-antigen export system permease protein.
  
  
 0.814
Krad_2361
Hypothetical protein.
       0.768
Krad_0012
Non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05453 probable protein-tyrosine kinase.
  
 
 0.731
Krad_1155
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.646
Krad_3890
PFAM: glycosyl transferase family 2; KEGG: aau:AAur_2603 putative glycosyl transferase, group 2 family domain protein.
  
  
 0.589
Krad_2360
PFAM: aminoglycoside phosphotransferase; KEGG: rpc:RPC_0130 aminoglycoside phosphotransferase.
     
 0.545
Krad_1048
PFAM: sugar transferase; KEGG: ace:Acel_1939 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.526
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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