STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2407KEGG: dra:DR1912 protein-tyrosine phosphatase, putative. (228 aa)    
Predicted Functional Partners:
Krad_3711
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bad:BAD_0390 low molecular weight protein-tyrosine-phosphatase.
     
 0.944
Krad_4111
PFAM: cutinase; KEGG: mul:MUL_0856 cutinase precursor, Cut3.
   
 
 0.942
Krad_0011
SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: sma:SAV2909 low molecular weight protein tyrosine phosphatase.
     
 0.908
Krad_1220
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_1909 ferredoxin.
    
 
 0.832
Krad_0555
Sulphate transporter; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sco:SCO3276 integral membrane transporter.
   
   0.787
Krad_0022
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.696
Krad_2408
Hypothetical protein.
       0.447
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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