STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2543PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3776 sugar ABC transporter permease. (300 aa)    
Predicted Functional Partners:
Krad_2544
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0317 sugar ABC transporter permease.
   0.968
Krad_2545
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 putative multiple sugar transport system substrate-binding protein.
 
 
 0.891
Krad_0295
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_2946 binding-protein-dependent transport systems inner membrane component.
 
 0.870
Krad_0964
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_0686 putative ABC-type sugar transport systems, permease components.
 
 0.870
Krad_4091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4157 binding-protein-dependent transport systems inner membrane component.
 
 0.870
Krad_4401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0953 binding-protein-dependent transport systems inner membrane component.
 
 0.868
Krad_4146
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4376 putative transmembrane component of ABC transporter.
   0.867
Krad_3565
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0935 multiple sugar transport system permease protein.
 
 0.866
Krad_0116
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100258 putative permease component of ABC transporter.
 
 0.865
Krad_3963
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO2796 putative cellobiose transport permease.
 
 0.865
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.