STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2676PFAM: CopG domain protein DNA-binding domain protein; KEGG: fra:Francci3_1090 hypothetical protein. (65 aa)    
Predicted Functional Partners:
Krad_2677
TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: mav:MAV_3971 death-on-curing protein.
       0.828
Krad_2675
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rha:RHA1_ro00454 possible conserved polyketide synthesis monooxygenase.
       0.527
Krad_2678
Hypothetical protein.
       0.455
Krad_2679
Hypothetical protein.
       0.425
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.