STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2734KEGG: mva:Mvan_3509 conserved hypothetical protein. (119 aa)    
Predicted Functional Partners:
Krad_2735
Putative transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription activator effector binding; KEGG: mva:Mvan_3507 putative transcriptional regulator, MerR family.
 
     0.920
Krad_2733
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_0283 3-oxoacyl-[acyl-carrier-protein] reductase.
 
     0.844
Krad_2731
Hypothetical protein; KEGG: cel:Y25C1A.3 Y25C1A.3.
       0.471
Krad_2732
Hypothetical protein.
       0.471
Krad_3321
KEGG: sma:SAV3392 hypothetical protein.
  
     0.467
Krad_0067
KEGG: sco:SCO1139 integral membrane protein.
  
     0.432
Krad_0405
Hypothetical protein.
  
     0.431
Krad_0400
KEGG: rha:RHA1_ro04158 hypothetical protein; Belongs to the UPF0312 family.
 
     0.402
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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