STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2741PFAM: glycoside hydrolase family 3 domain protein; KEGG: bur:Bcep18194_C6710 beta-glucosidase. (670 aa)    
Predicted Functional Partners:
Krad_3436
PFAM: glycoside hydrolase family 3 domain protein; KEGG: rha:RHA1_ro02947 beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 
0.934
Krad_2530
PFAM: glycoside hydrolase family 3 domain protein; KEGG: art:Arth_1839 glycoside hydrolase, family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
 
  
 
0.931
Krad_0408
PFAM: glycoside hydrolase family 3 domain protein.
  
  
 
0.925
Krad_2526
PFAM: glycoside hydrolase family 1; KEGG: bad:BAD_1287 beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.906
Krad_3300
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: aau:AAur_3011 putative alpha glucosidase.
   
 
 0.906
Krad_3538
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sma:SAV5980 putative alpha-glucosidase.
   
 
 0.906
Krad_3961
Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: sco:SCO7558 putative beta-glucosidase.
    
 0.906
Krad_4117
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mva:Mvan_2546 alpha amylase, catalytic region.
   
 
 0.906
Krad_3823
Cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: sco:SCO0765 secreted endoglucanase.
    
 0.905
Krad_0265
PFAM: glycoside hydrolase family 4; KEGG: msm:MSMEG_0502 glucosidase.
     
 0.901
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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