STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2749PFAM: extracellular solute-binding protein family 5; KEGG: cef:CE2334 putative peptide binding protein. (550 aa)    
Predicted Functional Partners:
Krad_2747
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cef:CE2332 putative transport protein.
 
 0.971
Krad_2748
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cef:CE2333 putative transport protein.
 
 0.966
Krad_2744
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
    0.954
Krad_2745
PFAM: luciferase family protein; KEGG: pde:Pden_4901 luciferase family protein.
 
     0.944
Krad_2743
KEGG: cef:CE0176 hypothetical protein.
 
     0.922
Krad_2746
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE2331 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.845
Krad_0941
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3436 putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.
 
 
 0.809
Krad_0940
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3437 putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.747
Krad_2172
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_4386 ABC transporter permease protein.
 
 0.569
Krad_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr1603 ABC transporter permease protein.
 
 
 0.550
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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