STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2800KEGG: ani:AN8715.2 hypothetical protein. (165 aa)    
Predicted Functional Partners:
Krad_2801
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: nca:Noca_2007 ATP-binding region, ATPase domain protein domain protein.
       0.773
Krad_2802
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sco:SCO2143 two component system response regulator.
       0.773
Krad_2794
PFAM: aminoglycoside phosphotransferase.
       0.528
Krad_2795
KEGG: tfu:Tfu_2431 hypothetical protein.
       0.528
Krad_2796
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gvi:glr1067 HlyB/MsbA family ABC transporter.
       0.528
Krad_2797
PFAM: glycosyl transferase group 1; KEGG: ana:all5194 glycosyltransferase.
       0.528
Krad_2798
PFAM: glycosyl transferase group 1; KEGG: ana:all5195 glycosyltransferase.
       0.528
Krad_2799
KEGG: ana:all5196 hypothetical protein.
       0.528
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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