STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2909Hypothetical protein; KEGG: sma:SAV6427 transcriptional regulator. (86 aa)    
Predicted Functional Partners:
ssgB
Sporulation and cell division protein SsgA; Involved in sporulation-specific cell division. Required for early stages of sporulation. Important in the process of growth cessation prior to sporulation-specific cell division. Recruits cell division protein FtsZ to the future septum sites and tethers the contractile ring structure (Z ring) to the cytoplasmic membrane during sporulation. Stimulates polymerization and filament length of FtsZ in vitro (By similarity).
  
     0.716
Krad_3007
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: sma:SAV6861 DNA-binding protein.
  
     0.700
Krad_2910
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2115 ABC transporter, ATP-binding protein.
  
    0.626
Krad_1444
PFAM: protein of unknown function DUF503; KEGG: fal:FRAAL5759 hypothetical protein.
  
     0.607
Krad_3799
KEGG: sco:SCO3001 hypothetical protein.
  
     0.548
Krad_3919
KEGG: sma:SAV3341 hypothetical protein.
  
     0.530
Krad_1162
KEGG: sma:SAV3104 hypothetical protein.
  
     0.519
Krad_0447
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein.
  
     0.507
Krad_3243
PFAM: glycosyl transferase group 1; KEGG: sma:SAV6067 glycosyl transferase.
  
     0.482
Krad_3342
Putative transcriptional regulator, PucR family; KEGG: sco:SCO2386 hypothetical protein.
  
     0.481
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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