STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2913PFAM: cobalt transport protein; KEGG: nca:Noca_3351 cobalt transport protein. (218 aa)    
Predicted Functional Partners:
Krad_2912
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_3227 ABC transporter-related protein.
 
 0.999
Krad_2911
PFAM: BioY protein; KEGG: art:Arth_2113 BioY protein.
 
 0.997
Krad_0149
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbb:BCG_3721c putative dipeptide-transport ATP-binding protein ABC transporter DppD; Belongs to the ABC transporter superfamily.
  
 
 0.541
Krad_0942
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rha:RHA1_ro02221 ABC peptide transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
  
 
 0.541
Krad_1128
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rha:RHA1_ro04336 ABC peptide transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
  
 
 0.541
Krad_2170
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: msm:MSMEG_4388 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.541
Krad_2746
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cef:CE2331 putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.541
Krad_4236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx14230 ABC transporter, ATP-binding protein.
  
 
 0.541
Krad_2910
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2115 ABC transporter, ATP-binding protein.
       0.503
Krad_0717
PFAM: tRNA pseudouridine synthase; KEGG: tfu:Tfu_2616 tRNA pseudouridine synthase.
  
  
 0.499
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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