STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2919PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1989 ABC-type multidrug transport system ATPase componen. (334 aa)    
Predicted Functional Partners:
Krad_2920
PFAM: ABC-2 type transporter; KEGG: art:Arth_2100 ABC-2 type transporter.
 
  
 0.950
Krad_1369
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_4158 putative ABC transporter, ATP-binding protein.
 
   
0.831
Krad_0546
ABC transporter related; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV7409 putative ABC transporter ATP-binding protein.
 
    
0.767
mshC
Cysteine--tRNA ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
  
   
 0.610
Krad_3922
PFAM: ABC-2 type transporter; KEGG: nfa:nfa720 putative ABC transporter membrane protein.
  
 0.575
Krad_3974
Hypothetical protein; KEGG: sco:SCO3959 possible integral membrane protein.
  
 
 0.574
Krad_2915
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO1922 putative ABC transporter ATP-binding subunit.
     
0.570
Krad_2916
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: art:Arth_2104 FeS assembly protein SufD.
       0.566
Krad_2917
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: sco:SCO1925 hypothetical protein.
       0.566
Krad_2918
Putative transcriptional regulator; KEGG: tfu:Tfu_1988 putative DNA-binding protein.
       0.566
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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