STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_2961PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: nca:Noca_3022 glutamate synthase (ferredoxin). (1536 aa)    
Predicted Functional Partners:
Krad_0656
Ferredoxin--NADP(+) reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro02240 probable ferredoxin--NADP(+) reductase.
  
 
 0.999
Krad_2960
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aau:AAur_1843 putative NADH/NADPH dependent glutamate synthases, small subunit.
 0.999
Krad_1637
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: sco:SCO1613 putative glutamine synthetase.
  
 
 0.985
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: sma:SAV6867 putative carbamoyl-phosphate synthase large subunit.
  
 
 0.985
Krad_3291
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: ace:Acel_0923 glutamine synthetase, type I.
  
 
 0.985
Krad_3296
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: tfu:Tfu_0982 glutamine synthetase type I.
  
 
 0.985
Krad_4424
PFAM: glutamine synthetase catalytic region; KEGG: mva:Mvan_4030 glutamine synthetase, catalytic region.
  
 
 0.982
Krad_3797
PFAM: NAD-glutamate dehydrogenase; KEGG: sma:SAV5075 NAD-glutamate dehydrogenase.
     
 0.972
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.962
Krad_0771
PFAM: sugar isomerase (SIS); KEGG: ace:Acel_0556 glutamine--fructose-6-phosphate transaminase (isomerizing).
   
 0.962
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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