STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3086KEGG: csa:Csal_0081 hypothetical protein. (235 aa)    
Predicted Functional Partners:
Krad_3085
KEGG: oih:OB0964 hypothetical protein.
 
     0.958
Krad_3084
KEGG: fal:FRAAL3165 hypothetical protein.
       0.773
Krad_3251
PFAM: cytochrome c class I; KEGG: sco:SCO2150 cytochrome C heme-binding subunit.
 
  
 0.593
Krad_3250
PFAM: cytochrome c oxidase subunit III; KEGG: aau:AAur_2207 cytochrome c oxidase subunit III.
 
  
 0.582
Krad_3083
KEGG: msm:MSMEG_6233 hypothetical protein.
       0.562
Krad_3252
PFAM: Rieske [2Fe-2S] domain protein; KEGG: aau:AAur_2209 ubiquinol-cytochrome c reductase iron-sulfur subunit.
 
    0.549
Krad_3081
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mbb:BCG_2080c hypothetical protein.
 
     0.542
Krad_3253
PFAM: Cytochrome b/b6 domain; KEGG: aau:AAur_2210 ubiquinol-cytochrome c reductase cytochrome b subunit.
 
  
 0.533
Krad_0630
PFAM: ResB family protein; KEGG: aau:AAur_pTC10174 putative cytochrome c biogenesis membrane protein, ResB-like family.
  
     0.523
Krad_3259
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.505
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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