STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3308PFAM: stress protein; KEGG: pna:Pnap_4657 stress protein. (192 aa)    
Predicted Functional Partners:
Krad_0263
PFAM: stress protein; SMART: von Willebrand factor type A; KEGG: sco:SCO3939 hypothetical protein.
     0.977
Krad_3305
KEGG: sco:SCO2362 hypothetical protein.
 
     0.952
Krad_3306
KEGG: sma:SAV5809 hypothetical protein.
 
    0.952
Krad_3307
KEGG: rha:RHA1_ro02446 possible citrate lyase beta subunit.
 
     0.952
Krad_3304
KEGG: sco:SCO2361 hypothetical protein.
 
     0.949
Krad_3309
Uncharacterized protein involved in stress response-like; KEGG: rha:RHA1_ro08202 possible tellurium resistance protein.
 
  
 0.941
Krad_3770
PFAM: Tellurite resistance TerB; KEGG: rha:RHA1_ro01775 tellurium resistance protein.
  
 0.890
Krad_0404
Uncharacterized protein involved in stress response.
  
 0.861
Krad_3310
PFAM: protein of unknown function DUF475; KEGG: rha:RHA1_ro08201 possible integral membrane protein.
   
 0.838
Krad_3316
PFAM: toxic anion resistance family protein; KEGG: nar:Saro_2959 toxic anion resistance.
 
  
 0.508
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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