STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3316PFAM: toxic anion resistance family protein; KEGG: nar:Saro_2959 toxic anion resistance. (420 aa)    
Predicted Functional Partners:
Krad_3315
KEGG: fra:Francci3_2917 hypothetical protein.
 
  
 0.954
Krad_3313
Hypothetical protein.
  
  
 0.796
Krad_3314
KEGG: mca:MCA1631 hypothetical protein.
  
  
 0.796
Krad_3312
PFAM: protein of unknown function DUF124; KEGG: sus:Acid_4939 protein of unknown function DUF124.
 
     0.692
Krad_3310
PFAM: protein of unknown function DUF475; KEGG: rha:RHA1_ro08201 possible integral membrane protein.
 
   
 0.627
Krad_3311
PFAM: stress protein; KEGG: fal:FRAAL5898 tellurium resistance protein TerE.
 
  
 0.602
Krad_3308
PFAM: stress protein; KEGG: pna:Pnap_4657 stress protein.
 
  
 0.508
Krad_3307
KEGG: rha:RHA1_ro02446 possible citrate lyase beta subunit.
 
   
 0.410
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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