STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3412PFAM: protein of unknown function DUF1206; KEGG: nca:Noca_2420 protein of unknown function DUF1206. (269 aa)    
Predicted Functional Partners:
Krad_3413
PFAM: Acetyl xylan esterase; KEGG: art:Arth_3303 acetyl xylan esterase.
       0.563
Krad_3414
KEGG: sco:SCO6046 hypothetical protein.
       0.563
Krad_3415
PFAM: luciferase family protein; KEGG: sma:SAV1156 monooxygenase.
       0.563
Krad_3411
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.548
Krad_3416
Hypothetical protein.
       0.529
Krad_3039
PFAM: phosphoesterase PA-phosphatase related; KEGG: sma:SAV1501 hypothetical protein.
 
     0.461
Krad_0960
KEGG: rha:RHA1_ro05523 hypothetical protein.
  
     0.432
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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