STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3427PFAM: glycosyl transferase group 1; KEGG: mth:MTH450 LPS biosynthesis RfbU related protein. (435 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.947
Krad_3426
PFAM: LmbE family protein; KEGG: mma:MM2100 hypothetical protein.
 
  
 0.946
Krad_3428
PFAM: protein of unknown function DUF181; KEGG: mma:MM1458 hypothetical protein.
 
     0.945
Krad_3429
Hypothetical protein; KEGG: csa:Csal_1011 beta-lactamase-like protein.
 
     0.943
Krad_3682
PFAM: glycosyl transferase group 1; KEGG: sth:STH1101 glycosyl transferase.
  
  
 
0.928
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
 0.912
Krad_3689
TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sco:SCO3182 UTP-glucose-1-phosphate uridylyltransferase.
    
 0.910
Krad_3430
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_3569 oxidoreductase domain protein.
 
    0.907
Krad_0920
PFAM: glycosyl transferase family 20; KEGG: aau:AAur_0931 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
    
 0.905
Krad_3529
TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; KEGG: art:Arth_2153 4-alpha-glucanotransferase.
     
 0.904
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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