STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3432PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sco:SCO6575 hypothetical protein. (316 aa)    
Predicted Functional Partners:
Krad_3428
PFAM: protein of unknown function DUF181; KEGG: mma:MM1458 hypothetical protein.
     0.655
Krad_3426
PFAM: LmbE family protein; KEGG: mma:MM2100 hypothetical protein.
 
     0.619
Krad_3429
Hypothetical protein; KEGG: csa:Csal_1011 beta-lactamase-like protein.
 
     0.613
Krad_3427
PFAM: glycosyl transferase group 1; KEGG: mth:MTH450 LPS biosynthesis RfbU related protein.
 
     0.595
Krad_3430
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_3569 oxidoreductase domain protein.
  
    0.572
Krad_3431
Hypothetical protein.
       0.539
Krad_3433
PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: fal:FRAAL0601 conserved hypothetical protein; putative adenylate cyclase domain.
       0.504
Krad_4056
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rha:RHA1_ro01353 probable acetolactate synthase; Belongs to the TPP enzyme family.
  
  
 0.498
Krad_0391
PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel.
 
     0.458
Krad_4057
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rha:RHA1_ro01352 myo-inositol catabolism IolB protein.
  
  
 0.451
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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