STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3482Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO0289 probable transcriptional regulator. (359 aa)    
Predicted Functional Partners:
Krad_2529
PFAM: regulatory protein LacI; KEGG: mpa:MAP4300 hypothetical protein.
  
     0.762
Krad_0384
PFAM: regulatory protein LacI.
  
     0.740
Krad_2961
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: nca:Noca_3022 glutamate synthase (ferredoxin).
    
 
 0.614
Krad_3480
PFAM: glycoside hydrolase family 3 domain protein; KEGG: ace:Acel_2050 glycoside hydrolase, family 3 domain protein.
       0.480
Krad_3481
PFAM: oxidoreductase domain protein; KEGG: ace:Acel_1039 oxidoreductase domain protein.
       0.480
Krad_3479
Hypothetical protein; KEGG: mul:MUL_3476 conserved hypothetical secreted protein.
       0.429
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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