STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3484Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (442 aa)    
Predicted Functional Partners:
Krad_3483
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: mva:Mvan_2737 SUF system FeS assembly protein, NifU family.
 
 
 0.994
Krad_2915
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO1922 putative ABC transporter ATP-binding subunit.
  
 0.985
Krad_2917
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: sco:SCO1925 hypothetical protein.
 
 0.984
Krad_2916
TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: art:Arth_2104 FeS assembly protein SufD.
 
 
 0.929
Krad_4503
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; FAD dependent oxidoreductase; KEGG: aau:AAur_pTC20059 thioredoxin-disulfide reductase.
 
 
  0.914
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
   
 0.908
Krad_0457
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver; FAD dependent oxidoreductase.
  
 
  0.903
Krad_0508
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nfa:nfa45140 putative oxidoreductase.
  
 
  0.903
Krad_1092
Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: nca:Noca_0976 cystathionine gamma-synthase.
     
 0.903
Krad_1362
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: aau:AAur_0889 cystathionine gamma-synthase.
     
 0.903
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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