STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3528Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: sma:SAV4111 transcriptional regulator. (1005 aa)    
Predicted Functional Partners:
Krad_2311
PFAM: regulatory protein LuxR; KEGG: msm:MSMEG_6828 transcriptional regulator.
 
   
 0.585
Krad_3437
PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; Tetratricopeptide TPR_4; KEGG: msm:MSMEG_4431 putative regulatory protein.
 
   
 0.527
Krad_2325
PFAM: regulatory protein LuxR; SMART: AAA ATPase; KEGG: msm:MSMEG_6828 transcriptional regulator.
 
  
 0.475
Krad_2286
PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; Sigma-70 region 4 type 2; KEGG: msm:MSMEG_6828 transcriptional regulator.
 
  
 0.451
Krad_3529
TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; KEGG: art:Arth_2153 4-alpha-glucanotransferase.
       0.446
Krad_3232
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: nca:Noca_3086 protein kinase.
 
  
 
 0.445
Krad_2243
KEGG: art:Arth_4271 hypothetical protein.
   
    0.439
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.439
Krad_2323
PFAM: regulatory protein LuxR; KEGG: msm:MSMEG_6828 transcriptional regulator.
 
  
 0.438
Krad_2291
PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; KEGG: msm:MSMEG_6828 transcriptional regulator.
 
  
 0.436
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.