STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3579PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sco:SCO4323 hydrolase. (241 aa)    
Predicted Functional Partners:
Krad_0766
PFAM: FAD linked oxidase domain protein; KEGG: fal:FRAAL3861 putative glycolate oxidoreductase (partial match).
    
 0.906
Krad_3580
PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ace:Acel_0104 cold-shock DNA-binding domain protein.
       0.697
Krad_3581
KEGG: fal:FRAAL6731 hypothetical protein.
       0.605
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.556
Krad_3578
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.529
Krad_3582
KEGG: sco:SCO4331 hypothetical protein.
 
     0.497
Krad_3206
KEGG: ace:Acel_1003 hypothetical protein.
 
    0.449
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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