STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3628PFAM: FAD dependent oxidoreductase; KEGG: bbr:BB1499 putative monoxygenase. (487 aa)    
Predicted Functional Partners:
Krad_4350
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: tfu:Tfu_1487 putative lipase/esterase.
  
 0.920
Krad_1940
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nfa:nfa32620 putative lipase.
 
  
 0.909
Krad_2316
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: nfa:nfa32620 putative lipase.
 
  
 0.909
Krad_3629
KEGG: fal:FRAAL1263 conserved hypothetical protein; putative SAM domain.
       0.786
Krad_3630
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mva:Mvan_5050 molybdopterin biosynthesis MoaE.
       0.773
Krad_2737
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: fal:FRAAL2468 esterase.
 
  
 0.758
Krad_2098
PFAM: Saccharopine dehydrogenase; KEGG: art:Arth_3626 saccharopine dehydrogenase.
  
   
 0.682
Krad_3631
KEGG: nca:Noca_3295 hypothetical protein.
 
     0.632
Krad_3632
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tfu:Tfu_2519 hypothetical protein.
 
     0.625
Krad_2524
PFAM: cytochrome P450; KEGG: fra:Francci3_1599 cytochrome P450.
 
 
 0.580
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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