STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (339 aa)    
Predicted Functional Partners:
Krad_3651
PFAM: NLPA lipoprotein; KEGG: lxx:Lxx15780 ABC-type transport systems, periplasmic component.
 
 0.999
Krad_3653
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdi:DIP0608 putative ABC transport system membrane protein.
 0.999
Krad_1870
PFAM: protein of unknown function DUF214; KEGG: ava:Ava_2862 protein of unknown function DUF214.
 
      0.899
Krad_0147
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB2519 probable ABC-transport protein, inner membrane component.
 
    0.844
Krad_3861
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3775 binding-protein-dependent transport systems inner membrane component.
 
    0.799
Krad_2171
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr1603 ABC transporter permease protein.
 
    0.740
Krad_0928
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_3909 polar amino acid ABC transporter, inner membrane subunit.
 
    
 0.726
Krad_2747
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cef:CE2332 putative transport protein.
 
    0.690
Krad_1127
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cef:CE1886 putative peptide ABC transporter permease protein.
 
    0.663
Krad_4151
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mkm:Mkms_5030 polar amino acid ABC transporter, inner membrane subunit.
   
 0.644
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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