STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3671PFAM: glycosyl transferase family 2; KEGG: nha:Nham_3045 glycosyl transferase, family 2. (300 aa)    
Predicted Functional Partners:
Krad_3670
PFAM: glycosyl transferase family 2; KEGG: mxa:MXAN_7448 glycosyl transferase, group 2 family protein.
 
 
 0.884
Krad_3285
PFAM: glycosyl transferase family 2; KEGG: fra:Francci3_1567 glycosyl transferase, family 2.
 
 
 0.732
Krad_0013
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: rha:RHA1_ro05742 sugar transferase.
 
   
 0.554
Krad_0969
KEGG: fra:Francci3_1855 hypothetical protein.
  
 
 0.475
Krad_3800
KEGG: aau:AAur_1649 hypothetical protein.
  
 
 0.475
Krad_4224
KEGG: mkm:Mkms_5414 conserved hypothetical protein.
  
 
 0.475
Krad_3672
Hypothetical protein; KEGG: nca:Noca_4185 lipopolysaccharide biosynthesis.
       0.467
Krad_2798
PFAM: glycosyl transferase group 1; KEGG: ana:all5195 glycosyltransferase.
 
     0.454
Krad_3885
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2673 O-antigen export system, ATP-binding protein.
 
   
 0.432
Krad_3151
KEGG: fra:Francci3_3164 hypothetical protein.
  
 
 0.426
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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