STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3706KEGG: rso:RSc2082 putative lipase transmembrane protein. (248 aa)    
Predicted Functional Partners:
Krad_3703
PFAM: transport system permease protein; KEGG: cef:CE0882 putative iron ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.752
Krad_3704
PFAM: transport system permease protein; KEGG: cgb:cg0927 ABC-type cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.752
Krad_3705
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjk:jk1884 ABC-type enterochelin transport system ATPase component.
       0.752
Krad_3702
PFAM: periplasmic binding protein; KEGG: cef:CE0881 putative iron transport protein.
       0.694
Krad_3707
Hypothetical protein; KEGG: afm:Afu2g17000 PT repeat family.
     
 0.667
rpmA
PFAM: ribosomal protein L27; KEGG: art:Arth_2390 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.533
rplL
Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
   0.530
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.522
rplQ
PFAM: ribosomal protein L17; KEGG: aau:AAur_2917 ribosomal protein L17.
    
   0.522
rpsI
PFAM: ribosomal protein S9; KEGG: nca:Noca_0890 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.522
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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