STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3707Hypothetical protein; KEGG: afm:Afu2g17000 PT repeat family. (864 aa)    
Predicted Functional Partners:
Krad_3706
KEGG: rso:RSc2082 putative lipase transmembrane protein.
     
 0.667
Krad_3703
PFAM: transport system permease protein; KEGG: cef:CE0882 putative iron ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.646
Krad_3704
PFAM: transport system permease protein; KEGG: cgb:cg0927 ABC-type cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.646
Krad_3705
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjk:jk1884 ABC-type enterochelin transport system ATPase component.
       0.646
Krad_3702
PFAM: periplasmic binding protein; KEGG: cef:CE0881 putative iron transport protein.
       0.599
Krad_1103
PFAM: protein of unknown function DUF255; KEGG: tfu:Tfu_0451 conserved hypothetical protein.
    
 
 0.508
acpP
Phosphopantetheine-binding; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.450
Krad_3708
KEGG: nfa:nfa45030 hypothetical protein.
       0.417
Krad_3709
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na?? symporter; KEGG: nfa:nfa45040 putative transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.417
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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