STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3724PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO4462 integral membrane protein. (391 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
    0.782
Krad_3725
PFAM: luciferase family protein; KEGG: sco:SCO5024 oxidoreductase.
 
     0.757
Krad_3721
PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: aau:AAur_0717 NADH-dependent dehydrogenase.
  
    0.547
Krad_3726
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6567 ABC transporter ATP binding protein.
       0.547
Krad_3727
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sma:SAV1827 putative ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.547
Krad_3722
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: art:Arth_0574 xylose isomerase domain protein TIM barrel.
       0.532
Krad_0801
PFAM: protein of unknown function DUF718; KEGG: nfa:nfa32910 hypothetical protein.
  
  
 0.513
Krad_3728
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sco:SCO6569 putative secreted solute binding protein.
       0.448
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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