STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3775PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psp:PSPPH_1370 xenobiotic reductase, putative. (379 aa)    
Predicted Functional Partners:
Krad_3774
PFAM: protein of unknown function DUF179; KEGG: sma:SAV5129 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.775
Krad_3773
KEGG: art:Arth_2589 hypothetical protein.
       0.714
Krad_0657
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: art:Arth_2742 electron transfer flavoprotein beta-subunit.
  
 
 0.590
Krad_0898
Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: sma:SAV3970 putative CarD-like transcriptional regulator.
   
    0.577
Krad_3776
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eba:ebA2924 hypothetical protein.
       0.545
Krad_3772
PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: AAA ATPase; DEAD-like helicases; KEGG: mul:MUL_2038 conserved hypothetical alanine and arginine rich protein.
       0.515
Krad_3771
KEGG: chu:CHU_2500 hypothetical protein.
       0.507
Krad_3503
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: sco:SCO6026 fatty acid oxidation complex alpha-subunit.
  
  
 0.480
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.452
Krad_3770
PFAM: Tellurite resistance TerB; KEGG: rha:RHA1_ro01775 tellurium resistance protein.
  
    0.447
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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