STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3818KEGG: mul:MUL_4274 hypothetical protein. (392 aa)    
Predicted Functional Partners:
Krad_3817
KEGG: art:Arth_2714 integral membrane protein.
 
     0.955
Krad_3816
KEGG: sco:SCO3015 integral membrane protein.
 
     0.949
Krad_3820
PFAM: protein of unknown function DUF58; KEGG: nca:Noca_3911 protein of unknown function DUF58.
 
  
 0.949
Krad_3819
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sma:SAV5058 putative regulatory protein.
     0.902
Krad_3829
PFAM: protein of unknown function DUF95 transmembrane; KEGG: nca:Noca_3912 integral membrane protein.
 
    0.787
Krad_3834
PFAM: RDD domain containing protein; KEGG: nca:Noca_3913 RDD domain containing protein.
 
    0.783
Krad_3813
KEGG: art:Arth_2710 hypothetical protein.
 
     0.568
Krad_3821
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: art:Arth_3639 ABC transporter related.
       0.533
Krad_3822
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: art:Arth_3638 ABC transporter, transmembrane region.
       0.533
Krad_3812
KEGG: mpa:MAP3356c hypothetical protein.
 
     0.475
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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