STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3825PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: rha:RHA1_ro04710 bifunctional ABC transporter. (514 aa)    
Predicted Functional Partners:
Krad_3826
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL4164 putative ABC transporter transmembrane.
     0.946
Krad_3828
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rba:RB5871 cell division protein FtsH homolog.
   
  0.804
Krad_3827
PFAM: beta-lactamase; KEGG: sco:SCO7561 esterase.
       0.773
Krad_0747
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5448 putative ABC transporter.
 
     0.723
Krad_3824
PFAM: protein of unknown function DUF72; KEGG: art:Arth_3443 protein of unknown function DUF72.
       0.521
Krad_3550
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2806 ABC transporter related.
 
 
  
0.464
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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