STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3829PFAM: protein of unknown function DUF95 transmembrane; KEGG: nca:Noca_3912 integral membrane protein. (332 aa)    
Predicted Functional Partners:
Krad_3834
PFAM: RDD domain containing protein; KEGG: nca:Noca_3913 RDD domain containing protein.
 
    0.872
Krad_3820
PFAM: protein of unknown function DUF58; KEGG: nca:Noca_3911 protein of unknown function DUF58.
 
  
 0.826
Krad_3817
KEGG: art:Arth_2714 integral membrane protein.
 
    0.787
Krad_3818
KEGG: mul:MUL_4274 hypothetical protein.
 
    0.787
Krad_3816
KEGG: sco:SCO3015 integral membrane protein.
 
     0.779
Krad_3830
KEGG: sco:SCO0713 lipase (secreted protein).
  
    0.585
Krad_3819
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sma:SAV5058 putative regulatory protein.
 
    0.531
Krad_0880
KEGG: art:Arth_3011 hypothetical protein.
  
     0.433
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.