STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3869PFAM: putative ammonia monooxygenase; KEGG: mva:Mvan_1609 putative ammonia monooxygenase. (358 aa)    
Predicted Functional Partners:
Krad_3868
KEGG: art:Arth_1191 hypothetical protein.
       0.773
Krad_3867
KEGG: rxy:Rxyl_1179 hypothetical protein.
       0.540
Krad_3864
KEGG: ace:Acel_0439 hypothetical protein.
       0.523
Krad_3865
PFAM: glycosyl transferase group 1; Methyltransferase type 11; KEGG: tfu:Tfu_2522 glycosyl transferase.
       0.523
Krad_3866
PFAM: glycosyl transferase family 2; KEGG: fra:Francci3_0730 glycosyl transferase, family 2.
       0.523
Krad_0068
PFAM: protein of unknown function DUF112 transmembrane; KEGG: art:Arth_1393 protein of unknown function DUF112, transmembrane.
 
    0.450
Krad_0066
PFAM: Uncharacterized protein UPF0065; KEGG: dge:Dgeo_0833 uncharacterized protein UPF0065.
 
    0.431
Krad_0067
KEGG: sco:SCO1139 integral membrane protein.
  
    0.412
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.