STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3887PFAM: glycosyl transferase family 2; KEGG: art:Arth_2693 glycosyl transferase, family 2. (669 aa)    
Predicted Functional Partners:
Krad_3886
PFAM: ABC-2 type transporter; KEGG: aau:AAur_2674 O-antigen export system permease protein.
 
  
 0.972
Krad_3888
PFAM: UDP-galactopyranose mutase; KEGG: aau:AAur_2676 UDP-galactopyranose mutase.
 
  
 0.972
Krad_3885
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2673 O-antigen export system, ATP-binding protein.
 
  
 0.934
Krad_3882
PFAM: UbiA prenyltransferase; KEGG: rha:RHA1_ro04056 possible 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
  
 0.931
Krad_3890
PFAM: glycosyl transferase family 2; KEGG: aau:AAur_2603 putative glycosyl transferase, group 2 family domain protein.
 
  
 0.888
Krad_3883
PFAM: phosphoesterase PA-phosphatase related; KEGG: cef:CE2713 hypothetical protein.
     
 0.880
Krad_3884
KEGG: rha:RHA1_ro00154 hypothetical protein.
  
  
 0.788
Krad_3881
PFAM: GtrA family protein; KEGG: nca:Noca_1597 GtrA family protein.
       0.780
Krad_3880
KEGG: mle:ML1504 probable conserved membrane protein.
       0.773
Krad_0013
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: rha:RHA1_ro05742 sugar transferase.
  
  
 0.744
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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