STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3891Hypothetical protein; KEGG: mbb:BCG_3841 putative transmembrane protein alanine and leucine rich. (680 aa)    
Predicted Functional Partners:
Krad_3890
PFAM: glycosyl transferase family 2; KEGG: aau:AAur_2603 putative glycosyl transferase, group 2 family domain protein.
 
     0.835
Krad_3892
PFAM: glycosyl transferase group 1; KEGG: gka:GK3157 hypothetical protein.
 
     0.810
Krad_3898
KEGG: mbb:BCG_3690 hypothetical protein.
 
   
 0.781
Krad_3889
PFAM: acyltransferase 3; KEGG: mbb:BCG_0560 putative membrane acyltransferase.
       0.773
Krad_3897
PFAM: glycosyl transferase family 2; KEGG: cef:CE0335 putative glycosyl transferase.
 
     0.728
Krad_3888
PFAM: UDP-galactopyranose mutase; KEGG: aau:AAur_2676 UDP-galactopyranose mutase.
 
   
 0.695
Krad_3887
PFAM: glycosyl transferase family 2; KEGG: art:Arth_2693 glycosyl transferase, family 2.
 
     0.693
Krad_3882
PFAM: UbiA prenyltransferase; KEGG: rha:RHA1_ro04056 possible 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
 
     0.610
Krad_3893
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mkm:Mkms_5416 GntR domain protein.
       0.594
Krad_3885
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2673 O-antigen export system, ATP-binding protein.
     
 0.583
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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